Computational Biology Lab

Download Clustering Source:

Version 1.0


About:


The following software represents a robust framework for the identification of structural variants using clone-end sequencing. Unlike previous methods, our approach does not rely on an a priori determined mapping of all reads to the reference. Instead, we build a framework for finding the most probable assignment of sequenced clones to potential structural variants based on the other clones.

Please see the paper for more details.

News:


August 9, 2008 -

Dataset is available (MySQL tables for Trace and BLAT hits)




April 14, 2008 -

New version of the paper uploaded to the website




January 18, 2008 -

Website created and version 1.0 of source and results were uploaded to the website.